EnhancerDB
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  3. rs375595892[chr16:85342824]
Enhancers that have rs375595892[chr16:85342824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs375595892[chr16:85342824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85342397 85343313 TCF7L2 GTRD no Colon (HCT116) 21723115
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 21723116
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213643
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213644
chr16 85342596 85345224 ZNF143 GTRD no Epithelial (MCF-7) 108213645
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 21723117
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213646
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213647
chr16 85342680 85345212 TCF7L2 GTRD no Colon (HCT116) 108213648
chr16 85342734 85343322 TCF7L2 GTRD no Colon (HCT116) 21723118
chr16 85342809 85342824 FOXP1 JASPAR yes 12045286
chr16 85342823 85342835 PKNOX2 JASPAR yes 12045287
chr16 85342824 85342834 ID4 JASPAR yes 12045288
chr16 85342824 85342834 TCF4 JASPAR yes 12045289
Genes associated with rs375595892[chr16:85342824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More