EnhancerDB
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  3. rs376106002[chr5:90596056]
Enhancers that have rs376106002[chr5:90596056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 90595425 90613326 enh22427
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376106002[chr5:90596056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 90596043 90596058 TFAP2C JASPAR yes 64189714
chr5 90596045 90596059 NR2F1 JASPAR yes 64189716
chr5 90596045 90596060 TFAP2A JASPAR yes 64189717
Genes associated with rs376106002[chr5:90596056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More