EnhancerDB
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  3. rs376233788[chr15:40364613]
Enhancers that have rs376233788[chr15:40364613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376233788[chr15:40364613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40363461 40364951 TCF7L2 GTRD no Colon (HCT116) 21649872
chr15 40363484 40364618 TCF7L2 GTRD no Colon (HCT116) 21649873
chr15 40364116 40364620 ZNF274 GTRD no Bone Marrow (K562) 21649876
chr15 40364178 40364796 ZNF274 GTRD no Bone Marrow (K562) 21649877
chr15 40364345 40364733 TCF7L2 GTRD no Colon (HCT116) 21649878
chr15 40364605 40364620 FOXP1 JASPAR yes 22926503
chr15 40364610 40364622 IRF1 JASPAR yes 22926504
Genes associated with rs376233788[chr15:40364613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More