EnhancerDB
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  3. rs376309007[chr2:25517917]
Enhancers that have rs376309007[chr2:25517917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25506105 25541255 enh18357
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs376309007[chr2:25517917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25517648 25517934 RUNX3 UCSC Txn Factor no Conserved 108431383
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431384
chr2 25517776 25518295 EBF1 UCSC Txn Factor no Conserved 108431385
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431386
chr2 25517806 25518515 POLR2A UCSC Txn Factor no Conserved 108431387
chr2 25517909 25517924 TFAP2A JASPAR yes 72463041
chr2 25517909 25517924 TFAP2C JASPAR yes 72463042
chr2 25517910 25517924 GLIS2 JASPAR yes 72463043
chr2 25517910 25517924 GLIS3 JASPAR yes 72463044
chr2 25517911 25517924 TFAP2A JASPAR yes 72463045
chr2 25517911 25517924 TFAP2B JASPAR yes 72463046
chr2 25517911 25517924 TFAP2C JASPAR yes 72463047
chr2 25517911 25517925 EBF1 JASPAR yes 72463048
chr2 25517912 25517923 EBF1 JASPAR yes 72463049
chr2 25517912 25517924 TFAP2A JASPAR yes 72463050
chr2 25517912 25517926 PLAG1 JASPAR yes 72463051
chr2 25517914 25517923 TFAP2A JASPAR yes 72463052
chr2 25517917 25517933 ZNF143 JASPAR yes 72463053
Genes associated with rs376309007[chr2:25517917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More