EnhancerDB
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  3. rs376734653[chr19:13279035]
Enhancers that have rs376734653[chr19:13279035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs376734653[chr19:13279035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13276981 13279046 ZBTB33 GTRD no Lung (A549) 108389526
chr19 13277766 13279253 ZNF274 GTRD no Cervix (HeLa-S3) 21851206
chr19 13277766 13279253 ZNF274 GTRD no Cervix (HeLa-S3) 108389537
chr19 13278401 13279061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851315
chr19 13278401 13279061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108389657
chr19 13278420 13279090 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108389668
chr19 13278645 13279101 ZNF274 GTRD no Bone Marrow (K562) 21851369
chr19 13278645 13279101 ZNF274 GTRD no Bone Marrow (K562) 108389717
chr19 13278742 13279140 ZNF274 GTRD no Bone Marrow (K562) 21851371
chr19 13278742 13279140 ZNF274 GTRD no Bone Marrow (K562) 108389719
chr19 13279021 13279042 IRF1 JASPAR yes 112515055
chr19 13279023 13279038 FOXP1 JASPAR yes 112515056
chr19 13279023 13279044 IRF1 JASPAR yes 112515057
chr19 13279027 13279041 IRF7 JASPAR yes 112515058
chr19 13279027 13279048 IRF1 JASPAR yes 112515059
chr19 13279028 13279043 FOXP1 JASPAR yes 112515060
chr19 13279028 13279049 IRF1 JASPAR yes 112515061
chr19 13279029 13279044 PRDM1 JASPAR yes 112515062
chr19 13279029 13279050 IRF1 JASPAR yes 112515063
chr19 13279031 13279046 STAT2 JASPAR yes 112515064
chr19 13279032 13279046 STAT1 JASPAR yes 112515065
chr19 13279033 13279047 IRF7 JASPAR yes 112515066
chr19 13279033 13279054 IRF1 JASPAR yes 112515067
chr19 13279034 13279049 FOXP1 JASPAR yes 112515068
chr19 13279035 13279050 PRDM1 JASPAR yes 112515069
Genes associated with rs376734653[chr19:13279035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More