EnhancerDB
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  3. rs3768579[chr1:22353136]
Enhancers that have rs3768579[chr1:22353136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22343446 22360375 enh116
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Stomach
Transcript factors that have rs3768579[chr1:22353136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22353130 22353138 HOXA5 JASPAR yes 27339384
Genes associated with rs3768579[chr1:22353136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 22379120 22419437 + CDC42 ENSG00000070831.11 22379120 25984 Thyroid 0.107038 297