EnhancerDB
  1. Home
  2. SNP
  3. rs376905410[chr1:55042210]
Enhancers that have rs376905410[chr1:55042210]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs376905410[chr1:55042210]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55042206 55042221 MEF2C JASPAR yes 28994648
chr1 55042207 55042222 MEF2A JASPAR yes 28994649
chr1 55042208 55042220 MEF2A JASPAR yes 28994650
chr1 55042208 55042220 MEF2D JASPAR yes 28994651
chr1 55042209 55042224 IRF9 JASPAR yes 28994652
Genes associated with rs376905410[chr1:55042210], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More