EnhancerDB
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  3. rs377335253[chr1:55026754]
Enhancers that have rs377335253[chr1:55026754]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs377335253[chr1:55026754]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55026744 55026760 POU4F2 JASPAR yes 28992435
chr1 55026746 55026761 FOXP1 JASPAR yes 28992436
chr1 55026750 55026765 FOXP1 JASPAR yes 28992437
chr1 55026751 55026763 FOXC2 JASPAR yes 28992438
chr1 55026753 55026757 YY1 TRANSFAC yes 28992439
chr1 55026753 55026774 IRF1 JASPAR yes 28992440
Genes associated with rs377335253[chr1:55026754], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More