EnhancerDB
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  3. rs377420983[chr1:204046088]
Enhancers that have rs377420983[chr1:204046088]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs377420983[chr1:204046088]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204046083 204046090 NKX3-1 JASPAR yes 34676472
chr1 204046085 204046101 RFX4 JASPAR yes 34676473
chr1 204046087 204046090 MYB TRANSFAC yes 34676474
Genes associated with rs377420983[chr1:204046088], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More