EnhancerDB
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  3. rs377490962[chr16:89538352]
Enhancers that have rs377490962[chr16:89538352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs377490962[chr16:89538352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89538345 89538357 TFAP2A JASPAR yes 12347985
chr16 89538345 89538357 TFAP2B JASPAR yes 12347986
chr16 89538345 89538357 TFAP2C JASPAR yes 12347987
Genes associated with rs377490962[chr16:89538352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More