EnhancerDB
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  3. rs377606532[chr19:13954768]
Enhancers that have rs377606532[chr19:13954768]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs377606532[chr19:13954768]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 21852081
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 108390139
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 21852086
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 108390141
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 21852107
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 108390142
chr19 13954294 13954770 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852205
chr19 13954294 13954770 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390147
chr19 13954330 13954794 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852207
chr19 13954330 13954794 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108390150
chr19 13954331 13954795 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852208
chr19 13954331 13954795 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390151
chr19 13954333 13954863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852209
chr19 13954333 13954863 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390152
chr19 13954340 13954836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852210
chr19 13954340 13954836 TCF7L2 UCSC Txn Factor no Conserved 108390153
chr19 13954340 13954836 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108390154
chr19 13954459 13954911 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852214
chr19 13954459 13954911 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108390158
chr19 13954564 13954828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852217
chr19 13954564 13954828 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108390162
chr19 13954748 13954768 RREB1 JASPAR yes 112537274
chr19 13954749 13954769 RREB1 JASPAR yes 112537275
chr19 13954756 13954776 RREB1 JASPAR yes 112537279
chr19 13954757 13954771 GLIS2 JASPAR yes 112537280
chr19 13954757 13954771 GLIS3 JASPAR yes 112537281
chr19 13954759 13954779 RREB1 JASPAR yes 112537282
chr19 13954764 13954776 ZBTB7A JASPAR yes 112537283
chr19 13954765 13954777 GLI2 JASPAR yes 112537284
chr19 13954765 13954777 ZBTB7B JASPAR yes 112537285
chr19 13954765 13954777 ZBTB7C JASPAR yes 112537286
Genes associated with rs377606532[chr19:13954768], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More