EnhancerDB
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  3. rs3785858[chr17:59390182]
Enhancers that have rs3785858[chr17:59390182]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs3785858[chr17:59390182]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59390172 59390187 TFAP2A JASPAR yes 55146868
chr17 59390175 59390186 TFAP2A JASPAR yes 55146869
chr17 59390175 59390186 TFAP2B JASPAR yes 55146870
chr17 59390175 59390186 TFAP2C JASPAR yes 55146871
chr17 59390176 59390185 TFAP2A JASPAR yes 55146872
Genes associated with rs3785858[chr17:59390182], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More