EnhancerDB
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Enhancers that have rs3826454[chr17:34219824]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 34219582 34220299 vista24547
VISTA
Transcript factors that have rs3826454[chr17:34219824]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34219287 34219883 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751088
chr17 34219287 34219883 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251379
chr17 34219287 34219883 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251380
chr17 34219639 34220023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21751092
chr17 34219639 34220023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108251384
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 21751093
chr17 34219657 34221401 TEF1 GTRD no Bone (Osteoblast) 108251385
chr17 34219811 34219825 EBF1 JASPAR yes 21226133
chr17 34219811 34219825 EBF1 JASPAR yes 54019826
chr17 34219812 34219827 TFAP2A JASPAR yes 21226134
chr17 34219812 34219827 TFAP2C JASPAR yes 21226135
chr17 34219812 34219827 TFAP2A JASPAR yes 54019827
chr17 34219812 34219827 TFAP2C JASPAR yes 54019828
chr17 34219813 34219824 EBF1 JASPAR yes 21226136
chr17 34219813 34219824 EBF1 JASPAR yes 54019829
chr17 34219818 34219824 MZF1 JASPAR yes 21226138
chr17 34219818 34219824 MZF1 JASPAR yes 54019831
chr17 34219818 34219831 NFKB1 JASPAR yes 21226139
chr17 34219818 34219831 NFKB2 JASPAR yes 21226140
chr17 34219818 34219831 NFKB1 JASPAR yes 54019832
chr17 34219818 34219831 NFKB2 JASPAR yes 54019833
chr17 34219819 34219829 REL JASPAR yes 21226141
chr17 34219819 34219829 REL JASPAR yes 54019834
chr17 34219819 34219830 NFKB1 JASPAR yes 21226142
chr17 34219819 34219830 NFKB1 JASPAR yes 54019835
chr17 34219820 34219830 NFKB1 JASPAR yes 21226143
chr17 34219820 34219830 RELA JASPAR yes 21226144
chr17 34219820 34219830 REL JASPAR yes 21226145
chr17 34219820 34219830 NFKB1 JASPAR yes 54019836
chr17 34219820 34219830 RELA JASPAR yes 54019837
chr17 34219820 34219830 REL JASPAR yes 54019838
chr17 34219820 34219831 NFKB1 JASPAR yes 21226146
chr17 34219820 34219831 NFKB1 JASPAR yes 54019839
chr17 34219821 34219830 NF-kappaB TRANSFAC yes 21226147
chr17 34219821 34219830 NF-kappaB TRANSFAC yes 54019840
chr17 34219824 34219832 FEV JASPAR yes 21226148
chr17 34219824 34219832 FEV JASPAR yes 54019841
Genes associated with rs3826454[chr17:34219824], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More