EnhancerDB
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  3. rs3837790[chr16:70727765]
Enhancers that have rs3837790[chr16:70727765]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 70721614 70763135 enh16759
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs3837790[chr16:70727765]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 70727591 70728768 ZNF143 GTRD no Epithelial (MCF-7) 21713155
chr16 70727591 70728768 ZNF143 GTRD no Epithelial (MCF-7) 108204857
chr16 70727625 70728816 TCF7L2 GTRD no Colon (HCT116) 21713156
chr16 70727625 70728816 TCF7L2 GTRD no Colon (HCT116) 108204858
chr16 70727709 70728050 ZBTB33 GTRD no Lung (A549) 108204859
chr16 70727712 70728067 TCF7L2 GTRD no Colon (HCT116) 21713157
chr16 70727712 70728067 TCF7L2 GTRD no Colon (HCT116) 108204860
chr16 70727754 70727766 GLI2 JASPAR yes 11327734
chr16 70727757 70727772 ZIC3 JASPAR yes 11327735
chr16 70727757 70727772 ZIC4 JASPAR yes 11327736
chr16 70727758 70727772 GLIS2 JASPAR yes 11327737
chr16 70727758 70727772 GLIS3 JASPAR yes 11327738
chr16 70727764 70727777 NFKB1 JASPAR yes 11327739
Genes associated with rs3837790[chr16:70727765], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More