EnhancerDB
  1. Home
  2. SNP
  3. rs3842272[chr11:65270090]
Enhancers that have rs3842272[chr11:65270090]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65232865 65270235 enh1826
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs3842272[chr11:65270090]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979933
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979934
chr11 65263683 65276353 POLR2A UCSC Txn Factor no Conserved 107979935
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494448
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21494449
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979937
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979938
chr11 65263822 65275612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107979939
chr11 65266467 65271002 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21494915
chr11 65267337 65275736 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21494952
chr11 65267337 65275736 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107980236
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21494954
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21494955
chr11 65267384 65275547 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107980237
chr11 65269702 65270222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495079
chr11 65269815 65270165 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495080
chr11 65269910 65271139 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21495081
chr11 65269929 65270163 ZNF143 GTRD no Epithelial (MCF-7) 21495082
chr11 65269948 65273538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495083
chr11 65269948 65273538 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495084
chr11 65269953 65270409 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495085
chr11 65269960 65271118 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495086
chr11 65269960 65271118 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495087
chr11 65269996 65270276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495088
chr11 65269998 65270242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495089
chr11 65270014 65270350 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21495090
chr11 65270019 65270329 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21495091
chr11 65270036 65270272 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21495092
chr11 65270078 65270092 STAT1 JASPAR yes 39324764
chr11 65270078 65270093 STAT2 JASPAR yes 39324765
chr11 65270080 65275455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495093
chr11 65270080 65275455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21495094
chr11 65270080 65275455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107980238
chr11 65270084 65270105 IRF1 JASPAR yes 39324767
chr11 65270086 65270101 PRDM1 JASPAR yes 39324768
chr11 65270086 65270101 STAT2 JASPAR yes 39324769
chr11 65270089 65270104 FOXP1 JASPAR yes 39324770
chr11 65270090 65270105 FOXP1 JASPAR yes 39324771
Genes associated with rs3842272[chr11:65270090], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More