EnhancerDB
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  3. rs386389980[chr2:38946916]
Enhancers that have rs386389980[chr2:38946916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs386389980[chr2:38946916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38946913 38946928 FOXP1 JASPAR yes 73169588
chr2 38946914 38946929 FOXP1 JASPAR yes 73169589
chr2 38946915 38946930 FOXP1 JASPAR yes 73169590
chr2 38946915 38946936 IRF1 JASPAR yes 73169591
chr2 38946916 38946931 FOXP1 JASPAR yes 73169592
chr2 38946916 38946937 IRF1 JASPAR yes 73169593
Genes associated with rs386389980[chr2:38946916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More