EnhancerDB
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  3. rs3925280[chr1:113545516]
Enhancers that have rs3925280[chr1:113545516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113523667 113552555 enh569
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Ovary Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs3925280[chr1:113545516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113544854 113545990 P63 GTRD no Skin (Keratinocyte) 21329804
chr1 113544908 113545874 P63 GTRD no Skin (Keratinocyte) 21329805
chr1 113544921 113545701 P63 GTRD no Skin (Keratinocyte) 21329806
chr1 113544923 113545845 P63 GTRD no Skin (Keratinocyte) 21329807
chr1 113545511 113545530 PAX5 JASPAR yes 31606361
Genes associated with rs3925280[chr1:113545516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More