EnhancerDB
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  3. rs3935438[chr17:60256715]
Enhancers that have rs3935438[chr17:60256715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60253851 60272895 enh17275
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs3935438[chr17:60256715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777818
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 21777819
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280259
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280260
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280261
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280262
chr17 60247648 60257176 ZNF143 GTRD no Epithelial (MCF-7) 108280263
chr17 60255832 60256740 ZBTB33 GTRD no Brain (SK-N-SH) 108280364
chr17 60255952 60256808 ZBTB33 GTRD no Brain (SK-N-SH) 108280365
chr17 60256036 60256887 ZBTB33 GTRD no Brain (SK-N-SH) 108280370
chr17 60256493 60258596 ZNF143 GTRD no Epithelial (MCF-7) 21777913
chr17 60256493 60258596 ZNF143 GTRD no Epithelial (MCF-7) 108280374
chr17 60256568 60257064 ZBTB33 GTRD no Lung (A549) 108280375
chr17 60256705 60256715 TEAD4 JASPAR yes 55190248
Genes associated with rs3935438[chr17:60256715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More