EnhancerDB
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  3. rs3935564[chr1:206862029]
Enhancers that have rs3935564[chr1:206862029]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs3935564[chr1:206862029]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206862023 206862038 NR2C2 JASPAR yes 34817384
chr1 206862024 206862038 RXRB JASPAR yes 34817385
chr1 206862024 206862038 RXRG JASPAR yes 34817386
chr1 206862024 206862039 HNF4A JASPAR yes 34817387
Genes associated with rs3935564[chr1:206862029], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More