EnhancerDB
  1. Home
  2. SNP
  3. rs3972219[chr17:63018533]
Enhancers that have rs3972219[chr17:63018533]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63011625 63027955 enh4532
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs3972219[chr17:63018533]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63018434 63020107 P63 GTRD no Skin (Keratinocyte) 21780994
chr17 63018434 63020107 P63 GTRD no Skin (Keratinocyte) 108283291
chr17 63018487 63019810 P63 GTRD no Skin (Keratinocyte) 21780995
chr17 63018487 63019810 P63 GTRD no Skin (Keratinocyte) 108283292
chr17 63018518 63018533 FOXP1 JASPAR yes 55339890
chr17 63018518 63018539 IRF1 JASPAR yes 55339891
chr17 63018519 63018534 FOXP1 JASPAR yes 55339892
chr17 63018520 63018535 FOXP1 JASPAR yes 55339893
chr17 63018522 63018537 PRDM1 JASPAR yes 55339894
chr17 63018522 63018543 IRF1 JASPAR yes 55339895
Genes associated with rs3972219[chr17:63018533], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More