EnhancerDB
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  3. rs397693312[chr17:25901483]
Enhancers that have rs397693312[chr17:25901483]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25884725 25904399 enh17065
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr17 25898536 25901861 vista677
VISTA
Transcript factors that have rs397693312[chr17:25901483]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25901017 25901832 GATA1 UCSC Txn Factor no Conserved 107687833
chr17 25901475 25901488 EOMES JASPAR yes 9310
chr17 25901475 25901488 EOMES JASPAR yes 53647468
chr17 25901476 25901484 MGA JASPAR yes 9311
chr17 25901476 25901484 MGA JASPAR yes 53647469
Genes associated with rs397693312[chr17:25901483], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More