EnhancerDB
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  3. rs397697296[chr1:54767991]
Enhancers that have rs397697296[chr1:54767991]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs397697296[chr1:54767991]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54767985 54768006 IRF1 JASPAR yes 28970675
chr1 54767986 54768007 IRF1 JASPAR yes 28970676
chr1 54767990 54768005 FOXP1 JASPAR yes 28970677
chr1 54767991 54768006 FOXP1 JASPAR yes 28970678
Genes associated with rs397697296[chr1:54767991], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More