EnhancerDB
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  3. rs397719780[chr12:53767278]
Enhancers that have rs397719780[chr12:53767278]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53754815 53768707 enh2366
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs397719780[chr12:53767278]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53766813 53768059 ZNF143 GTRD no Epithelial (MCF-7) 21549387
chr12 53766977 53767336 ZNF274 GTRD no Cervix (HeLa-S3) 21549388
chr12 53767072 53767528 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21549389
chr12 53767149 53768110 ZNF274 GTRD no Cervix (HeLa-S3) 21549390
chr12 53767261 53768079 ZNF143 GTRD no Epithelial (MCF-7) 21549391
chr12 53767268 53767281 SMAD2 JASPAR yes 120983861
chr12 53767278 53767282 NFE TRANSFAC yes 120983862
Genes associated with rs397719780[chr12:53767278], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More