EnhancerDB
  1. Home
  2. SNP
  3. rs397721728[chr16:89539587]
Enhancers that have rs397721728[chr16:89539587]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397721728[chr16:89539587]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89539577 89539587 SP1 JASPAR yes 12348171
chr16 89539584 89539599 FOXP1 JASPAR yes 12348172
chr16 89539585 89539600 FOXP1 JASPAR yes 12348173
chr16 89539586 89539601 FOXP1 JASPAR yes 12348174
Genes associated with rs397721728[chr16:89539587], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More