EnhancerDB
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  3. rs397723979[chr12:52552988]
Enhancers that have rs397723979[chr12:52552988]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs397723979[chr12:52552988]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52552009 52553052 TCF7L2 GTRD no Colon (HCT116) 21546536
chr12 52552750 52553226 TCF7L2 GTRD no Colon (HCT116) 21546537
Genes associated with rs397723979[chr12:52552988], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More