EnhancerDB
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  3. rs397725727[chr1:225643731]
Enhancers that have rs397725727[chr1:225643731]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397725727[chr1:225643731]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225643728 225643743 FOXP1 JASPAR yes 35742528
chr1 225643729 225643744 FOXP1 JASPAR yes 35742529
chr1 225643730 225643745 FOXP1 JASPAR yes 35742530
chr1 225643730 225643751 IRF1 JASPAR yes 35742531
chr1 225643731 225643746 FOXP1 JASPAR yes 35742532
chr1 225643731 225643752 IRF1 JASPAR yes 35742533
Genes associated with rs397725727[chr1:225643731], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More