EnhancerDB
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  3. rs397726801[chr1:212468000]
Enhancers that have rs397726801[chr1:212468000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212456045 212470579 enh910
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Stomach
Transcript factors that have rs397726801[chr1:212468000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212467986 212468001 PRDM1 JASPAR yes 35119275
chr1 212467986 212468004 IRF2 JASPAR yes 35119276
chr1 212467988 212468003 FOXP1 JASPAR yes 35119277
chr1 212467989 212468000 FOXA1 JASPAR yes 35119278
chr1 212467990 212468002 FOXC2 JASPAR yes 35119279
chr1 212467991 212468002 FOXP2 JASPAR yes 35119280
chr1 212467992 212468000 FOXO3 JASPAR yes 35119281
chr1 212467993 212468002 SRY JASPAR yes 35119282
chr1 212467995 212468004 SOX9 JASPAR yes 35119283
chr1 212467996 212468012 SOX8 JASPAR yes 35119284
Genes associated with rs397726801[chr1:212468000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More