EnhancerDB
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  3. rs397728065[chr1:230356027]
Enhancers that have rs397728065[chr1:230356027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230338765 230362772 enh27598
Bone Marrow (K562) Liver Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs397728065[chr1:230356027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230356015 230356036 IRF1 JASPAR yes 36035678
chr1 230356016 230356037 IRF1 JASPAR yes 36035679
chr1 230356020 230356032 IRF1 JASPAR yes 36035680
chr1 230356021 230356042 IRF1 JASPAR yes 36035681
chr1 230356022 230356028 TCF4 TRANSFAC yes 36035682
chr1 230356022 230356037 FOXP1 JASPAR yes 36035683
chr1 230356022 230356043 IRF1 JASPAR yes 36035684
chr1 230356023 230356034 FOXP2 JASPAR yes 36035685
chr1 230356023 230356035 FOXC2 JASPAR yes 36035686
chr1 230356023 230356038 STAT2 JASPAR yes 36035687
chr1 230356024 230356039 FOXP1 JASPAR yes 36035688
Genes associated with rs397728065[chr1:230356027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More