EnhancerDB
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  3. rs397732734[chr19:2539321]
Enhancers that have rs397732734[chr19:2539321]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397732734[chr19:2539321]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2539300 2539321 IRF1 JASPAR yes 112071449
chr19 2539306 2539321 FOXP1 JASPAR yes 112071453
chr19 2539307 2539322 FOXP1 JASPAR yes 112071454
chr19 2539308 2539323 FOXP1 JASPAR yes 112071455
chr19 2539310 2539330 RREB1 JASPAR yes 112071456
chr19 2539311 2539326 MEF2C JASPAR yes 112071457
Genes associated with rs397732734[chr19:2539321], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More