EnhancerDB
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  3. rs397742154[chr17:57934296]
Enhancers that have rs397742154[chr17:57934296]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 57934217 57936802 vista708
VISTA
Transcript factors that have rs397742154[chr17:57934296]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57934296 57934305 NKX3-2 JASPAR yes 17005
chr17 57934296 57934305 NKX3-2 JASPAR yes 55089828
chr17 57934296 57934306 NKX2-3 JASPAR yes 17006
chr17 57934296 57934306 NKX2-3 JASPAR yes 55089829
Genes associated with rs397742154[chr17:57934296], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More