EnhancerDB
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  3. rs397743506[chr2:28874806]
Enhancers that have rs397743506[chr2:28874806]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397743506[chr2:28874806]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28874793 28874808 STAT2 JASPAR yes 72664446
chr2 28874796 28874811 FOXP1 JASPAR yes 72664447
chr2 28874798 28874813 FOXP1 JASPAR yes 72664448
chr2 28874801 28874811 HOXB13 JASPAR yes 72664449
chr2 28874802 28874814 FOXI1 JASPAR yes 72664450
chr2 28874803 28874815 FOXC2 JASPAR yes 72664451
chr2 28874805 28874809 YY1 TRANSFAC yes 72664452
Genes associated with rs397743506[chr2:28874806], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More