EnhancerDB
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  3. rs397754283[chr5:149175352]
Enhancers that have rs397754283[chr5:149175352]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 149167853 149192675 enh8796
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397754283[chr5:149175352]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 149175335 149175352 RXRA JASPAR yes 66845893
chr5 149175339 149175360 ZNF263 JASPAR yes 66845894
chr5 149175342 149175363 ZNF263 JASPAR yes 66845896
chr5 149175344 149175358 PLAG1 JASPAR yes 66845897
chr5 149175344 149175359 NR2C2 JASPAR yes 66845898
chr5 149175345 149175355 SP1 JASPAR yes 66845899
chr5 149175345 149175359 PLAG1 JASPAR yes 66845900
chr5 149175346 149175356 SP1 JASPAR yes 66845901
chr5 149175351 149175371 PPARG JASPAR yes 66845903
Genes associated with rs397754283[chr5:149175352], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More