EnhancerDB
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  3. rs397772594[chr17:25850411]
Enhancers that have rs397772594[chr17:25850411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs397772594[chr17:25850411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25850406 25850421 MEF2C JASPAR yes 53640603
chr17 25850408 25850423 FOXP1 JASPAR yes 53640604
chr17 25850409 25850424 FOXP1 JASPAR yes 53640605
chr17 25850410 25850416 TBP TRANSFAC yes 53640606
chr17 25850410 25850425 FOXP1 JASPAR yes 53640607
chr17 25850410 25850431 IRF1 JASPAR yes 53640608
chr17 25850411 25850426 FOXP1 JASPAR yes 53640609
chr17 25850411 25850432 IRF1 JASPAR yes 53640610
Genes associated with rs397772594[chr17:25850411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More