EnhancerDB
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  3. rs397775172[chr1:2203157]
Enhancers that have rs397775172[chr1:2203157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs397775172[chr1:2203157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2203141 2203159 ESR1 JASPAR yes 26229925
chr1 2203149 2203163 EBF1 JASPAR yes 26229927
chr1 2203150 2203161 EBF1 JASPAR yes 26229928
chr1 2203151 2203163 TFAP2A JASPAR yes 26229929
chr1 2203151 2203163 TFAP2B JASPAR yes 26229930
chr1 2203151 2203163 TFAP2C JASPAR yes 26229931
chr1 2203151 2203164 TFAP2A JASPAR yes 26229932
chr1 2203151 2203164 TFAP2B JASPAR yes 26229933
chr1 2203151 2203164 TFAP2C JASPAR yes 26229934
chr1 2203151 2203166 TFAP2A JASPAR yes 26229935
chr1 2203151 2203166 TFAP2C JASPAR yes 26229936
chr1 2203152 2203163 EBF1 JASPAR yes 26229937
chr1 2203154 2203168 GLIS2 JASPAR yes 26229938
chr1 2203154 2203168 GLIS3 JASPAR yes 26229939
chr1 2203155 2203165 ZNF740 JASPAR yes 26229940
chr1 2203156 2203166 SP1 JASPAR yes 26229941
chr1 2203156 2203166 ZNF740 JASPAR yes 26229942
chr1 2203157 2203167 SP1 JASPAR yes 26229943
chr1 2203157 2203167 ZNF740 JASPAR yes 26229944
Genes associated with rs397775172[chr1:2203157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More