EnhancerDB
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  3. rs397776619[chr1:19263449]
Enhancers that have rs397776619[chr1:19263449]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397776619[chr1:19263449]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19263445 19263449 LFA1 TRANSFAC yes 27163372
chr1 19263447 19263462 FOXP1 JASPAR yes 27163373
chr1 19263448 19263463 FOXP1 JASPAR yes 27163374
chr1 19263449 19263464 FOXP1 JASPAR yes 27163375
chr1 19263449 19263470 IRF1 JASPAR yes 27163376
Genes associated with rs397776619[chr1:19263449], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More