EnhancerDB
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  3. rs397778402[chr10:33421217]
Enhancers that have rs397778402[chr10:33421217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 33393842 33437095 enh1172
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs397778402[chr10:33421217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 33421208 33421229 IRF1 JASPAR yes 126574790
chr10 33421211 33421225 SPI1 JASPAR yes 126574791
chr10 33421211 33421232 IRF1 JASPAR yes 126574792
chr10 33421213 33421234 IRF1 JASPAR yes 126574793
chr10 33421214 33421229 FOXP1 JASPAR yes 126574794
chr10 33421214 33421235 IRF1 JASPAR yes 126574795
chr10 33421216 33421231 FOXP1 JASPAR yes 126574796
chr10 33421217 33421232 FOXP1 JASPAR yes 126574797
Genes associated with rs397778402[chr10:33421217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More