EnhancerDB
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  3. rs397780054[chr17:55613453]
Enhancers that have rs397780054[chr17:55613453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397780054[chr17:55613453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55613450 55613465 FOXP1 JASPAR yes 54965923
chr17 55613452 55613467 FOXP1 JASPAR yes 54965924
Genes associated with rs397780054[chr17:55613453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More