EnhancerDB
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  3. rs397796852[chr17:4118582]
Enhancers that have rs397796852[chr17:4118582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 4117405 4128259 enh52406
Skin (Keratinocyte) Prostate (RWPE1) Large Intestine Esophagus Bone (Osteoblast) Muscle (A673) Uterus Stomach
chr17 4118580 4118797 vista23773
VISTA
Transcript factors that have rs397796852[chr17:4118582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 4118271 4118588 ZNF143 GTRD no Epithelial (MCF-7) 108232187
chr17 4118294 4118712 ZNF274 GTRD no Liver (HepG2) 108232188
chr17 4118477 4119137 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232189
chr17 4118512 4119196 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232190
chr17 4118571 4119091 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232191
chr17 4118577 4118592 MEF2C JASPAR yes 21187169
chr17 4118577 4118592 MEF2C JASPAR yes 52819415
chr17 4118579 4119099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108232192
chr17 4118580 4118595 FOXP1 JASPAR yes 21187170
chr17 4118580 4118595 FOXP1 JASPAR yes 52819416
chr17 4118581 4118587 TBP TRANSFAC yes 21187171
chr17 4118581 4118587 TBP TRANSFAC yes 52819417
chr17 4118581 4118596 FOXP1 JASPAR yes 21187172
chr17 4118581 4118596 FOXP1 JASPAR yes 52819418
chr17 4118582 4118597 FOXP1 JASPAR yes 21187173
chr17 4118582 4118597 FOXP1 JASPAR yes 52819419
chr17 4118582 4118603 IRF1 JASPAR yes 21187174
chr17 4118582 4118603 IRF1 JASPAR yes 52819420
Genes associated with rs397796852[chr17:4118582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More