EnhancerDB
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  3. rs397797182[chr2:38946610]
Enhancers that have rs397797182[chr2:38946610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs397797182[chr2:38946610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38946607 38946622 FOXP1 JASPAR yes 73169531
chr2 38946608 38946623 FOXP1 JASPAR yes 73169532
chr2 38946609 38946624 FOXP1 JASPAR yes 73169533
chr2 38946609 38946630 IRF1 JASPAR yes 73169534
chr2 38946610 38946625 FOXP1 JASPAR yes 73169535
Genes associated with rs397797182[chr2:38946610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More