EnhancerDB
  1. Home
  2. SNP
  3. rs397807874[chr10:90139188]
Enhancers that have rs397807874[chr10:90139188]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 90137445 90154474 enh1412
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs397807874[chr10:90139188]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 90139183 90139204 IRF1 JASPAR yes 128945595
chr10 90139187 90139208 IRF1 JASPAR yes 128945596
chr10 90139188 90139203 FOXP1 JASPAR yes 128945597
Genes associated with rs397807874[chr10:90139188], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More