EnhancerDB
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Enhancers that have rs397811475[chr1:212082323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs397811475[chr1:212082323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212081666 212082326 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21377440
chr1 212082045 212082467 ZNF274 GTRD no Bone Marrow (K562) 21377451
chr1 212082309 212083176 ZNF274 GTRD no Bone Marrow (K562) 21377452
chr1 212082316 212082326 ALX3 JASPAR yes 35089874
chr1 212082316 212082326 GSX2 JASPAR yes 35089875
chr1 212082316 212082326 MIXL1 JASPAR yes 35089876
chr1 212082316 212082326 MNX1 JASPAR yes 35089877
chr1 212082317 212082325 ISX JASPAR yes 35089878
chr1 212082317 212082325 LMX1A JASPAR yes 35089879
chr1 212082317 212082325 LMX1B JASPAR yes 35089880
chr1 212082317 212082325 NKX6-1 JASPAR yes 35089881
chr1 212082317 212082325 NKX6-2 JASPAR yes 35089882
chr1 212082317 212082325 PRRX1 JASPAR yes 35089883
chr1 212082317 212082325 RAX2 JASPAR yes 35089884
chr1 212082317 212082325 SHOX JASPAR yes 35089885
chr1 212082317 212082325 UNCX JASPAR yes 35089886
chr1 212082317 212082325 VAX1 JASPAR yes 35089887
chr1 212082318 212082339 IRF1 JASPAR yes 35089888
chr1 212082319 212082334 FOXP1 JASPAR yes 35089889
chr1 212082322 212082328 TBP TRANSFAC yes 35089890
chr1 212082322 212082343 IRF1 JASPAR yes 35089891
chr1 212082323 212082338 FOXP1 JASPAR yes 35089892
chr1 212082323 212082344 IRF1 JASPAR yes 35089893
Genes associated with rs397811475[chr1:212082323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More