EnhancerDB
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  3. rs397824696[chr1:41260927]
Enhancers that have rs397824696[chr1:41260927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41258745 41277518 enh278
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs397824696[chr1:41260927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41260921 41260942 IRF1 JASPAR yes 28343839
chr1 41260922 41260943 IRF1 JASPAR yes 28343840
chr1 41260923 41260944 IRF1 JASPAR yes 28343841
chr1 41260924 41260945 IRF1 JASPAR yes 28343842
chr1 41260925 41260940 FOXP1 JASPAR yes 28343843
chr1 41260925 41260946 IRF1 JASPAR yes 28343844
chr1 41260926 41260941 FOXP1 JASPAR yes 28343845
chr1 41260926 41260947 IRF1 JASPAR yes 28343846
chr1 41260927 41260942 FOXP1 JASPAR yes 28343847
Genes associated with rs397824696[chr1:41260927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More