EnhancerDB
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  3. rs397836772[chr19:2540071]
Enhancers that have rs397836772[chr19:2540071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397836772[chr19:2540071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2539983 2541557 ZBTB33 GTRD no Lung (A549) 21836484
chr19 2539983 2541557 ZBTB33 GTRD no Lung (A549) 108361546
chr19 2540050 2540071 ZNF263 JASPAR yes 112071704
chr19 2540053 2540074 ZNF263 JASPAR yes 112071706
chr19 2540054 2540075 ZNF263 JASPAR yes 112071708
chr19 2540056 2540077 ZNF263 JASPAR yes 112071709
chr19 2540057 2540078 ZNF263 JASPAR yes 112071710
chr19 2540059 2540080 ZNF263 JASPAR yes 112071711
chr19 2540061 2540072 E2F6 JASPAR yes 112071712
chr19 2540061 2540082 ZNF263 JASPAR yes 112071713
chr19 2540063 2540084 ZNF263 JASPAR yes 112071714
chr19 2540065 2540076 E2F6 JASPAR yes 112071715
chr19 2540065 2540086 ZNF263 JASPAR yes 112071716
chr19 2540068 2540083 PRDM1 JASPAR yes 112071717
chr19 2540070 2540091 IRF1 JASPAR yes 112071718
chr19 2540071 2540092 ZNF263 JASPAR yes 112071719
Genes associated with rs397836772[chr19:2540071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More