EnhancerDB
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  3. rs397857978[chr17:62984653]
Enhancers that have rs397857978[chr17:62984653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 62984651 62984886 vista25543
VISTA
Transcript factors that have rs397857978[chr17:62984653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62984632 62985295 ZNF274 GTRD no Liver (HepG2) 21780798
chr17 62984632 62985295 ZNF274 GTRD no Liver (HepG2) 108283217
chr17 62984632 62985295 ZNF274 GTRD no Liver (HepG2) 108283218
chr17 62984639 62984876 NR3C1 UCSC Txn Factor no Conserved 108283219
chr17 62984650 62984665 FOXP1 JASPAR yes 21275114
chr17 62984650 62984665 FOXP1 JASPAR yes 55335892
chr17 62984651 62984666 FOXP1 JASPAR yes 21275115
chr17 62984651 62984666 FOXP1 JASPAR yes 55335893
chr17 62984652 62984667 FOXP1 JASPAR yes 21275116
chr17 62984652 62984667 FOXP1 JASPAR yes 55335894
chr17 62984653 62984668 FOXP1 JASPAR yes 21275117
chr17 62984653 62984668 FOXP1 JASPAR yes 55335895
chr17 62984653 62984674 IRF1 JASPAR yes 21275118
chr17 62984653 62984674 IRF1 JASPAR yes 55335896
Genes associated with rs397857978[chr17:62984653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More