EnhancerDB
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  3. rs397860524[chr1:227002598]
Enhancers that have rs397860524[chr1:227002598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs397860524[chr1:227002598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227002423 227003092 ZNF274 GTRD no Bone Marrow (K562) 21387633
chr1 227002423 227003092 ZNF274 GTRD no Bone Marrow (K562) 107876379
chr1 227002495 227003246 POLR2A UCSC Txn Factor no Conserved 107876380
chr1 227002561 227003241 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387634
chr1 227002561 227003241 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107876381
chr1 227002592 227002607 FOXP1 JASPAR yes 35847323
chr1 227002592 227002613 IRF1 JASPAR yes 35847324
chr1 227002593 227002608 FOXP1 JASPAR yes 35847325
chr1 227002597 227003247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21387635
chr1 227002597 227003247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107876382
Genes associated with rs397860524[chr1:227002598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More