EnhancerDB
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  3. rs397861676[chr1:21656626]
Enhancers that have rs397861676[chr1:21656626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs397861676[chr1:21656626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21656615 21656633 NR3C1 JASPAR yes 27296980
chr1 21656620 21656641 IRF1 JASPAR yes 27296981
chr1 21656622 21656637 PRDM1 JASPAR yes 27296982
chr1 21656622 21656637 STAT2 JASPAR yes 27296983
chr1 21656622 21656643 IRF1 JASPAR yes 27296984
chr1 21656623 21656644 IRF1 JASPAR yes 27296985
chr1 21656624 21656645 IRF1 JASPAR yes 27296986
chr1 21656625 21656640 FOXP1 JASPAR yes 27296987
chr1 21656625 21656646 IRF1 JASPAR yes 27296988
chr1 21656626 21656641 FOXP1 JASPAR yes 27296989
chr1 21656626 21656647 IRF1 JASPAR yes 27296990
Genes associated with rs397861676[chr1:21656626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More