EnhancerDB
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  3. rs397862361[chr1:54774273]
Enhancers that have rs397862361[chr1:54774273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs397862361[chr1:54774273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54774270 54774285 FOXP1 JASPAR yes 28971568
chr1 54774271 54774286 FOXP1 JASPAR yes 28971569
chr1 54774272 54774287 FOXP1 JASPAR yes 28971570
chr1 54774273 54774288 FOXP1 JASPAR yes 28971571
chr1 54774273 54774294 IRF1 JASPAR yes 28971572
Genes associated with rs397862361[chr1:54774273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More