EnhancerDB
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  3. rs397863546[chr1:41415228]
Enhancers that have rs397863546[chr1:41415228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs397863546[chr1:41415228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41415207 41415228 IRF1 JASPAR yes 28358679
chr1 41415212 41415233 IRF1 JASPAR yes 28358682
chr1 41415213 41415228 FOXP1 JASPAR yes 28358683
chr1 41415213 41415234 IRF1 JASPAR yes 28358684
chr1 41415214 41415229 STAT2 JASPAR yes 28358685
chr1 41415217 41415238 IRF1 JASPAR yes 28358686
chr1 41415218 41415233 FOXP1 JASPAR yes 28358687
chr1 41415218 41415239 IRF1 JASPAR yes 28358688
chr1 41415222 41415243 IRF1 JASPAR yes 28358689
chr1 41415223 41415238 FOXP1 JASPAR yes 28358690
chr1 41415225 41415240 FOXP1 JASPAR yes 28358691
chr1 41415227 41415242 FOXP1 JASPAR yes 28358692
chr1 41415228 41415243 FOXP1 JASPAR yes 28358693
Genes associated with rs397863546[chr1:41415228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More