EnhancerDB
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  3. rs397870394[chr2:38920625]
Enhancers that have rs397870394[chr2:38920625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs397870394[chr2:38920625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38920620 38920631 STAT3 JASPAR yes 73165419
chr2 38920620 38920635 MEF2C JASPAR yes 73165420
chr2 38920623 38920638 FOXP1 JASPAR yes 73165421
chr2 38920624 38920639 FOXP1 JASPAR yes 73165422
chr2 38920625 38920640 FOXP1 JASPAR yes 73165423
chr2 38920625 38920646 IRF1 JASPAR yes 73165424
Genes associated with rs397870394[chr2:38920625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More