EnhancerDB
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  3. rs397871548[chr2:26275339]
Enhancers that have rs397871548[chr2:26275339]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs397871548[chr2:26275339]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26275333 26275354 IRF1 JASPAR yes 72519100
chr2 26275334 26275355 IRF1 JASPAR yes 72519101
chr2 26275335 26275339 H1TF2 TRANSFAC yes 72519102
chr2 26275335 26275339 NFE TRANSFAC yes 72519103
chr2 26275335 26275339 SRF TRANSFAC yes 72519104
chr2 26275336 26275357 IRF1 JASPAR yes 72519105
chr2 26275337 26275358 IRF1 JASPAR yes 72519106
chr2 26275338 26275353 FOXP1 JASPAR yes 72519107
chr2 26275338 26275359 IRF1 JASPAR yes 72519108
chr2 26275339 26275354 FOXP1 JASPAR yes 72519109
chr2 26275339 26275360 IRF1 JASPAR yes 72519110
Genes associated with rs397871548[chr2:26275339], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More